- drake an R-focused pipeline toolkit for data analysis projects. Featured in the rOpenSci blog and R Podcast Episode 22.
- txtq A small message queue for parallel processes.
- downsize Ease the transition between testing and deploying data analysis workflows.
- fbseq Fully-Bayesian GPU-accelerated analysis of RNA-seq data (arXiv preprint).
- fbseqCUDA CUDA GPU support for fbseq.
- fbseqOpenMP OpenMP support for fbseq.